AMAG_02288 protein (Allomyces macrogynus) - STRING interaction network

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Known Interactions

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Predicted Interactions

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gene co-occurrence

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Score

AMAG_02288

SANT_DAMP1_like domain-containing protein. (417 aa)

Predicted Functional Partners:

AMAG_05808

0.989

AMAG_08615

0.989

AMAG_10040

0.989

AMAG_12227

0.989

AMAG_05073

0.988

AMAG_06680

0.988

AMAG_11828

0.988

AMAG_12842

0.988

AMAG_00385

0.986

AMAG_01905

0.986

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_00385	AMAG_02288	A0A0L0RWG0	A0A0L0S1T0	Uncharacterized protein.	SANT_DAMP1_like domain-containing protein.	0.986
AMAG_00385	AMAG_05073	A0A0L0RWG0	A0A0L0S6N5	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.969
AMAG_00385	AMAG_05808	A0A0L0RWG0	A0A0L0SCZ9	Uncharacterized protein.	Uncharacterized protein.	0.905
AMAG_00385	AMAG_06680	A0A0L0RWG0	A0A0L0SEG0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.932
AMAG_00385	AMAG_08615	A0A0L0RWG0	A0A0L0SM23	Uncharacterized protein.	Uncharacterized protein.	0.968
AMAG_00385	AMAG_10040	A0A0L0RWG0	A0A0L0SQ60	Uncharacterized protein.	Uncharacterized protein.	0.968
AMAG_00385	AMAG_11828	A0A0L0RWG0	A0A0L0SY71	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.969
AMAG_00385	AMAG_12227	A0A0L0RWG0	A0A0L0SXC5	Uncharacterized protein.	Uncharacterized protein.	0.905
AMAG_00385	AMAG_12842	A0A0L0RWG0	A0A0L0T1H2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.932
AMAG_01905	AMAG_02288	A0A0L0S0B4	A0A0L0S1T0	Uncharacterized protein.	SANT_DAMP1_like domain-containing protein.	0.986
AMAG_01905	AMAG_05073	A0A0L0S0B4	A0A0L0S6N5	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.969
AMAG_01905	AMAG_05808	A0A0L0S0B4	A0A0L0SCZ9	Uncharacterized protein.	Uncharacterized protein.	0.905
AMAG_01905	AMAG_06680	A0A0L0S0B4	A0A0L0SEG0	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.932
AMAG_01905	AMAG_08615	A0A0L0S0B4	A0A0L0SM23	Uncharacterized protein.	Uncharacterized protein.	0.968
AMAG_01905	AMAG_10040	A0A0L0S0B4	A0A0L0SQ60	Uncharacterized protein.	Uncharacterized protein.	0.968
AMAG_01905	AMAG_11828	A0A0L0S0B4	A0A0L0SY71	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.969
AMAG_01905	AMAG_12227	A0A0L0S0B4	A0A0L0SXC5	Uncharacterized protein.	Uncharacterized protein.	0.905
AMAG_01905	AMAG_12842	A0A0L0S0B4	A0A0L0T1H2	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.932
AMAG_02288	AMAG_00385	A0A0L0S1T0	A0A0L0RWG0	SANT_DAMP1_like domain-containing protein.	Uncharacterized protein.	0.986
AMAG_02288	AMAG_01905	A0A0L0S1T0	A0A0L0S0B4	SANT_DAMP1_like domain-containing protein.	Uncharacterized protein.	0.986

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Network Stats

number of nodes:

11

number of edges:

29

average node degree:

5.27

avg. local clustering coefficient:

0.813

expected number of edges:

10

PPI enrichment p-value:

9.29e-07

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003700

DNA-binding transcription factor activity

9 of 102

1.48

2.58

4.68e-10

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:6493

LysR, substrate-binding, and Monocarboxylic acid transport

7 of 26

1.96

4.06

1.46e-10

CL:6489

Mixed, incl. LysR, substrate-binding, and SnoaL-like domain

8 of 45

1.78

3.71

4.29e-11

CL:6495

LysR, substrate-binding

6 of 21

1.99

3.64

4.35e-09

CL:6487

Mixed, incl. LysR, substrate-binding, and DNA binding HTH domain, AraC-type

11 of 100

1.57

3.52

8.07e-15

CL:6498

LysR, substrate-binding

5 of 15

2.06

3.21

1.25e-07

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005737

Cytoplasm

10 of 1105

0.49

0.35

0.0123

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0805

Transcription regulation

9 of 136

1.35

2.15

1.60e-09

KW-0238

DNA-binding

9 of 170

1.26

1.86

3.66e-09

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF03466

LysR substrate binding domain

9 of 29

2.02

5.42

1.23e-14

PF00126

Bacterial regulatory helix-turn-helix protein, lysR family

9 of 30

2.01

5.37

1.23e-14

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR005119

LysR, substrate-binding

9 of 29

2.02

5.31

3.10e-14

IPR000847

Transcription regulator HTH, LysR

9 of 31

2.0

5.21

3.10e-14

IPR036390

Winged helix DNA-binding domain superfamily

9 of 101

1.48

2.62

2.84e-10

IPR036388

Winged helix-like DNA-binding domain superfamily

9 of 137

1.35

2.12

2.91e-09

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