STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_02543Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
AMAG_12406
Ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.746
AMAG_00951
Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
   0.714
AMAG_02462
Ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
   
   0.714
AMAG_17560
Uncharacterized protein.
   
    0.706
AMAG_02970
60S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.690
AMAG_10252
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.690
AMAG_13467
Ribosomal protein L13.
   
   0.663
AMAG_13711
Ribosomal protein L13.
   
   0.663
AMAG_08502
Ribosomal protein S16.
   
   0.661
AMAG_09918
Ribosomal protein S16.
   
   0.661
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.