STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_03262Uncharacterized protein. (547 aa)    
Predicted Functional Partners:
AMAG_06713
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.845
AMAG_06725
Tryptophan synthase.
    
 0.826
AMAG_15921
Tryptophan synthase.
    
 0.826
AMAG_13550
Ribosomal protein L1.
  
 
 0.771
AMAG_13803
Ribosomal protein L1.
  
 
 0.771
AMAG_04542
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.762
AMAG_15725
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.762
AMAG_16440
JmjN domain-containing protein.
   
 0.752
AMAG_02369
Histone domain-containing protein.
    
 0.743
AMAG_09523
Histone domain-containing protein.
    
 0.743
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
Server load: low (30%) [HD]