STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_04702UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (334 aa)    
Predicted Functional Partners:
AMAG_03450
Uncharacterized protein.
  
 0.995
AMAG_04649
dTDP-glucose 4,6-dehydratase.
  
 
0.901
AMAG_03346
dTDP-glucose 4,6-dehydratase.
  
 
0.901
AMAG_05537
Uncharacterized protein.
    
 0.897
AMAG_15005
NAD-dependent epimerase/dehydratase.
  
 
 0.887
AMAG_01479
ERCC4 domain-containing protein.
    
 0.813
AMAG_06865
Uncharacterized protein.
    
 0.813
AMAG_01200
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
    
  0.772
AMAG_05386
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
    
  0.772
AMAG_18896
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 0.758
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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