STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_04776ARL2_Bind_BART domain-containing protein. (162 aa)    
Predicted Functional Partners:
AMAG_01540
Small GTP-binding protein domain; Belongs to the small GTPase superfamily. Arf family.
    
 0.985
AMAG_04036
Small GTP-binding protein domain; Belongs to the small GTPase superfamily. Arf family.
    
 0.985
AMAG_13133
DUF667 domain-containing protein.
    
 
 0.689
AMAG_17318
DUF667 domain-containing protein.
    
 
 0.689
AMAG_12131
Mitochondrial substrate carrier family protein ancA; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.622
AMAG_00553
Uncharacterized protein.
    
  0.577
AMAG_01064
Uncharacterized protein.
    
  0.577
AMAG_01886
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.577
AMAG_04843
Small GTP-binding protein domain; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.537
AMAG_02886
DUF667 domain-containing protein.
    
 
 0.504
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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