STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_03952Uncharacterized protein. (920 aa)    
Predicted Functional Partners:
AMAG_12959
Protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic.
   
 
 0.983
AMAG_02210
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.981
AMAG_11358
Protein transporter SEC61 subunit alpha.
    
 
 0.981
AMAG_19699
Sec62 family protein translocation protein.
    
 
 0.981
AMAG_12865
Uncharacterized protein.
    
 
 0.981
AMAG_13818
Protein transporter SEC61 subunit alpha.
    
 
 0.981
AMAG_14240
Uncharacterized protein.
    
 
 0.981
AMAG_14863
J domain-containing protein.
    
 
 0.981
AMAG_14434
Sec62 family protein translocation protein.
    
 
 0.981
AMAG_15338
J domain-containing protein.
    
 
 0.981
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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