STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_04069Uncharacterized protein. (1067 aa)    
Predicted Functional Partners:
AMAG_03772
Uncharacterized protein.
    
 
 0.695
AMAG_06922
Uncharacterized protein.
    
 
 0.695
AMAG_13052
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
    
 
 0.640
AMAG_17219
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family.
    
 
 0.640
AMAG_01329
SKIP_SNW domain-containing protein.
    
  0.608
AMAG_05521
SKIP_SNW domain-containing protein.
    
  0.608
AMAG_04744
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.607
AMAG_03426
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.607
AMAG_07634
PUM-HD domain-containing protein.
    
 
 0.567
AMAG_07892
Uncharacterized protein.
    
  0.567
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.