STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_03431Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
AMAG_04597
Uncharacterized protein.
    
 
 0.978
AMAG_11086
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 
 0.926
AMAG_01738
ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.909
AMAG_04230
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.909
AMAG_03780
Ubiquitin-40S ribosomal protein S27a.
    
   0.876
AMAG_11168
Ubiquitin-60S ribosomal protein L40.
    
   0.876
AMAG_13298
RRN7-type domain-containing protein.
    
   0.786
AMAG_16845
Uncharacterized protein.
    
   0.786
AMAG_11038
Uncharacterized protein.
     
 0.753
AMAG_11651
Beta-hexosaminidase.
     
 0.753
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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