STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_03699CMGC/SRPK protein kinase. (467 aa)    
Predicted Functional Partners:
AMAG_11985
Uncharacterized protein.
    
 0.980
AMAG_19492
Pre-mRNA-splicing factor CEF1.
    
   0.891
AMAG_07917
RRM domain-containing protein.
    
 0.854
AMAG_09579
RRM domain-containing protein.
    
 0.854
AMAG_19493
Myb_Cef domain-containing protein.
    
   0.831
AMAG_05682
Uncharacterized protein.
    
 0.730
AMAG_12354
Uncharacterized protein.
    
 0.730
AMAG_14785
RRM domain-containing protein.
    
 0.707
AMAG_15251
RRM domain-containing protein.
    
 0.707
AMAG_17891
RRM domain-containing protein.
    
 
 0.698
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.