STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_05961Archaeal ribosomal protein S17P, variant. (154 aa)    
Predicted Functional Partners:
AMAG_00193
40S ribosomal protein S29.
  
 0.999
TIF34
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
  0.999
AMAG_00890
30S ribosomal protein S13.
  
 0.999
AMAG_00922
40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.999
AMAG_00899
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
AMAG_01182
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
 
 0.999
AMAG_01255
Uncharacterized protein.
  
 0.999
AMAG_01578
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
AMAG_01281
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 0.999
AMAG_01584
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.