STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_06955Uncharacterized protein. (385 aa)    
Predicted Functional Partners:
AMAG_12701
Uncharacterized protein.
    
 0.983
AMAG_14666
Uncharacterized protein.
    
 0.910
AMAG_05673
VWFA domain-containing protein.
    
 0.804
AMAG_04821
SWIM-type domain-containing protein.
    
 0.649
AMAG_03500
SWIM-type domain-containing protein.
    
 0.649
AMAG_19145
DNA_ligase_A_N domain-containing protein.
    
 0.649
AMAG_10917
DNA ligase I, ATP-dependent (Dnl1); Belongs to the ATP-dependent DNA ligase family.
    
 0.649
AMAG_19571
DNA_ligase_A_C domain-containing protein.
    
 0.649
AMAG_18064
Ku domain-containing protein.
    
 0.648
AMAG_19377
Ku domain-containing protein.
    
 0.648
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.