STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_07022Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (706 aa)    
Predicted Functional Partners:
AMAG_14562
Uncharacterized protein.
   
 0.855
AMAG_20328
Uncharacterized protein.
   
 0.855
AMAG_12701
Uncharacterized protein.
    
 0.812
AMAG_14666
Uncharacterized protein.
    
 0.812
AMAG_07197
SCP2 domain-containing protein.
   
 0.766
AMAG_08109
SCP2 domain-containing protein.
   
 0.766
AMAG_10905
TPR_REGION domain-containing protein.
    
 0.731
AMAG_11502
TPR_REGION domain-containing protein.
    
 0.731
AMAG_00467
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.656
AMAG_00648
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.656
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.