STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_06268RHOMBOID-like protein. (616 aa)    
Predicted Functional Partners:
AMAG_01084
Prohibitin.
   
 0.527
AMAG_05264
Prohibitin.
   
 0.527
AMAG_00214
PHB domain-containing protein.
   
 0.523
AMAG_00241
PHB domain-containing protein.
   
 0.523
AMAG_05039
PHB domain-containing protein.
   
 0.523
AMAG_18858
PHB domain-containing protein.
   
 0.523
AMAG_07765
Prohibitin.
   
 0.523
AMAG_10618
PHB domain-containing protein.
   
 0.523
AMAG_19433
Band_7_C domain-containing protein.
   
 0.523
AMAG_10798
PHB domain-containing protein.
   
 0.523
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.