STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_06465Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (829 aa)    
Predicted Functional Partners:
AMAG_12741
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.987
AMAG_04599
Uncharacterized protein.
   
 0.972
AMAG_03322
Uncharacterized protein.
   
 0.972
AMAG_14585
Uncharacterized protein.
   
 0.970
AMAG_15509
Uncharacterized protein.
   
 0.970
AMAG_11390
Uncharacterized protein.
    
 0.962
AMAG_13850
Uncharacterized protein.
    
 0.962
AMAG_00440
PRKCSH domain-containing protein.
    
 0.961
AMAG_01962
PRKCSH domain-containing protein.
    
 0.961
AMAG_08936
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.961
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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