STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_08326FCP1 homology domain-containing protein. (386 aa)    
Predicted Functional Partners:
AMAG_16694
Uncharacterized protein.
    
 0.774
AMAG_16472
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.774
AMAG_12643
Uncharacterized protein.
    
 0.757
AMAG_07239
Mitochondrial import inner membrane translocase subunit.
    
 0.716
AMAG_08147
Mitochondrial import inner membrane translocase subunit.
    
 0.716
AMAG_09110
RNA_pol_L_2 domain-containing protein.
    
  0.714
AMAG_13055
Uncharacterized protein.
   
 0.702
AMAG_17217
Uncharacterized protein.
   
 0.702
AMAG_05226
Uncharacterized protein.
    
 0.686
AMAG_16121
Uncharacterized protein.
    
 0.686
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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