STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_08414DM10 domain-containing protein. (365 aa)    
Predicted Functional Partners:
AMAG_04888
Uncharacterized protein.
    
 0.974
AMAG_08502
Ribosomal protein S16.
  
  0.898
AMAG_09918
Ribosomal protein S16.
  
  0.898
AMAG_07244
Ribosomal_S10 domain-containing protein.
  
  0.895
AMAG_08151
Ribosomal_S10 domain-containing protein.
  
  0.895
AMAG_00551
30S ribosomal protein S12.
  
 0.894
AMAG_02062
30S ribosomal protein S12.
  
 0.894
AMAG_13453
Spindle pole body component.
    
 0.891
AMAG_13699
Spindle pole body component.
    
 0.891
AMAG_01310
GCP_C_terminal domain-containing protein.
    
 0.889
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.