STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_08617Uncharacterized protein. (2187 aa)    
Predicted Functional Partners:
AMAG_03704
Uncharacterized protein.
    
 0.997
AMAG_07674
Uncharacterized protein.
    
 0.985
AMAG_09828
Uncharacterized protein.
    
 0.985
AMAG_06078
Uncharacterized protein.
    
 0.975
AMAG_09297
Uncharacterized protein.
    
 0.975
AMAG_00522
Uncharacterized protein.
    
 0.965
AMAG_02034
Uncharacterized protein.
    
 0.965
AMAG_10963
Uncharacterized protein.
    
 0.965
AMAG_11560
Uncharacterized protein.
    
 0.965
AMAG_13444
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.902
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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