STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_08827Uncharacterized protein. (641 aa)    
Predicted Functional Partners:
AMAG_15807
UvrD-like helicase ATP-binding domain-containing protein.
   
 
 0.969
AMAG_19070
Uncharacterized protein.
   
 
 0.923
AMAG_16301
UvrD-like helicase ATP-binding domain-containing protein.
   
 
 0.762
AMAG_16343
UvrD-like helicase ATP-binding domain-containing protein.
   
 
 0.762
AMAG_18899
DNA-directed RNA polymerase II subunit rpb1.
   
 
 0.715
AMAG_07841
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.715
AMAG_09650
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.715
AMAG_12102
Zn(2)-C6 fungal-type domain-containing protein.
   
 
 0.715
AMAG_20284
Uncharacterized protein.
   
 
 0.715
AMAG_14346
mRNA cap guanine-N7 methyltransferase.
   
 
 0.703
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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