STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_09090HORMA domain-containing protein. (349 aa)    
Predicted Functional Partners:
AMAG_05779
PfkB domain-containing protein.
   
 
 0.759
AMAG_12252
PfkB domain-containing protein.
   
 
 0.759
AMAG_14896
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.730
AMAG_13392
RECA_2 domain-containing protein.
   
 
 0.691
AMAG_13646
RECA_2 domain-containing protein.
   
 
 0.691
AMAG_01934
Uncharacterized protein.
   
 
 0.667
AMAG_00339
Structural maintenance of chromosomes protein.
    
 
 0.633
AMAG_01859
Structural maintenance of chromosomes protein.
    
 
 0.633
AMAG_04831
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 
 0.618
AMAG_03509
Uncharacterized protein; Belongs to the RecA family.
   
 
 0.618
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.