STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_09097Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
AMAG_02673
CID domain-containing protein.
   
 
 0.970
AMAG_06362
CID domain-containing protein.
   
 
 0.970
AMAG_09365
Uncharacterized protein; Belongs to the cyclin family.
    
 0.917
AMAG_00532
CMGC/CDK protein kinase; Belongs to the protein kinase superfamily.
    
 0.900
AMAG_01820
CMGC/CDK/CRK7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.900
AMAG_02044
CMGC/CDK protein kinase; Belongs to the protein kinase superfamily.
    
 0.900
AMAG_04322
CMGC/CDK/CRK7 protein kinase.
    
 0.900
AMAG_00197
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.811
AMAG_10756
Uncharacterized protein.
    
 0.811
AMAG_02936
Transcription elongation factor S-II.
    
 0.793
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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