STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_09276Uncharacterized protein. (1149 aa)    
Predicted Functional Partners:
AMAG_07199
Yae1_N domain-containing protein.
   
  
 0.517
AMAG_08111
Yae1_N domain-containing protein.
   
  
 0.517
AMAG_15668
Uncharacterized protein.
   
  
 0.517
AMAG_17081
Uncharacterized protein.
   
  
 0.517
AMAG_04873
tRNA_int_endo domain-containing protein.
      
 0.489
AMAG_08541
tRNA_int_end_N2 domain-containing protein.
      
 0.485
AMAG_00764
BZIP domain-containing protein.
      
 0.465
AMAG_01770
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
      
 0.440
AMAG_00580
IRE protein kinase.
      
 0.400
AMAG_02089
IRE protein kinase.
      
 0.400
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.