AMAG_10010 protein (Allomyces macrogynus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMAG_10010

FBPase domain-containing protein; Belongs to the FBPase class 1 family. (347 aa)

Predicted Functional Partners:

AMAG_14597

0.835

AMAG_12955

0.770

AMAG_14151

0.770

AMAG_11198

0.748

AMAG_13027

0.748

AMAG_15043

0.748

AMAG_00074

0.724

AMAG_00702

0.724

AMAG_01217

0.724

AMAG_02203

0.724

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_00074	AMAG_10010	A0A0L0RUL7	A0A0L0SQ23	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	FBPase domain-containing protein; Belongs to the FBPase class 1 family.	0.724
AMAG_00074	AMAG_11198	A0A0L0RUL7	A0A0L0SVT0	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_00074	AMAG_12955	A0A0L0RUL7	A0A0L0T0H4	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.951
AMAG_00074	AMAG_13027	A0A0L0RUL7	A0A0L0T133	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_00074	AMAG_14151	A0A0L0RUL7	A0A0L0T4F1	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.951
AMAG_00074	AMAG_14597	A0A0L0RUL7	A0A0L0T717	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	0.917
AMAG_00074	AMAG_15043	A0A0L0RUL7	A0A0L0T5N3	Arabinan endo-1,5-alpha-L-arabinosidase; Belongs to the glycosyl hydrolase 43 family.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_00702	AMAG_10010	A0A0L0RWL0	A0A0L0SQ23	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	FBPase domain-containing protein; Belongs to the FBPase class 1 family.	0.724
AMAG_00702	AMAG_11198	A0A0L0RWL0	A0A0L0SVT0	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_00702	AMAG_12955	A0A0L0RWL0	A0A0L0T0H4	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.951
AMAG_00702	AMAG_13027	A0A0L0RWL0	A0A0L0T133	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_00702	AMAG_14151	A0A0L0RWL0	A0A0L0T4F1	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.951
AMAG_00702	AMAG_14597	A0A0L0RWL0	A0A0L0T717	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	0.917
AMAG_00702	AMAG_15043	A0A0L0RWL0	A0A0L0T5N3	Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_01217	AMAG_10010	A0A0L0RZ11	A0A0L0SQ23	Transketolase.	FBPase domain-containing protein; Belongs to the FBPase class 1 family.	0.724
AMAG_01217	AMAG_11198	A0A0L0RZ11	A0A0L0SVT0	Transketolase.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_01217	AMAG_12955	A0A0L0RZ11	A0A0L0T0H4	Transketolase.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.951
AMAG_01217	AMAG_13027	A0A0L0RZ11	A0A0L0T133	Transketolase.	Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.	0.760
AMAG_01217	AMAG_14151	A0A0L0RZ11	A0A0L0T4F1	Transketolase.	Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.	0.951
AMAG_01217	AMAG_14597	A0A0L0RZ11	A0A0L0T717	Transketolase.	Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.	0.917