STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_10962IF3_C domain-containing protein. (263 aa)    
Predicted Functional Partners:
AMAG_04725
Translation initiation factor IF-2.
   
 0.712
AMAG_03408
Translation initiation factor IF-2.
   
 0.712
AMAG_00510
MRP-S28 domain-containing protein.
   
 0.638
AMAG_02022
MRP-S28 domain-containing protein.
   
 0.638
AMAG_00943
Uncharacterized protein.
    
 0.589
AMAG_02450
Uncharacterized protein.
    
 0.589
AMAG_05963
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
 0.576
AMAG_09420
Uncharacterized protein.
    
 0.576
AMAG_18199
Uncharacterized protein.
    
  0.569
AMAG_06962
Uncharacterized protein.
    
  0.569
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.