STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_10968Nuclear pore protein. (837 aa)    
Predicted Functional Partners:
AMAG_18912
RanBP2-type domain-containing protein.
   
 0.997
AMAG_12601
Uncharacterized protein.
   
 0.996
AMAG_01253
Uncharacterized protein.
   
 0.980
AMAG_18456
Uncharacterized protein.
   
 0.980
AMAG_20740
Uncharacterized protein.
    
 0.978
AMAG_01809
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.974
AMAG_04311
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.974
AMAG_00386
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.967
AMAG_01906
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.967
AMAG_07666
Nsp1_C domain-containing protein.
   
 0.967
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.