STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_11116CRAL-TRIO domain-containing protein. (294 aa)    
Predicted Functional Partners:
AMAG_14666
Uncharacterized protein.
    
 0.650
AMAG_02770
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.618
AMAG_14878
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.618
AMAG_11086
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.615
AMAG_04441
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.581
AMAG_13389
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.581
AMAG_00535
GTP-binding protein rho1, variant.
    
 0.571
AMAG_00947
Small GTP-binding protein domain.
    
 0.571
AMAG_01710
Small GTP-binding protein domain.
    
 0.571
AMAG_02047
GTP-binding protein rho1.
    
 0.571
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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