STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_11170Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
AMAG_11292
Uncharacterized protein.
    
 0.882
AMAG_09133
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.838
AMAG_11906
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.838
AMAG_04932
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 
  0.812
AMAG_06727
PH domain-containing protein.
    
 0.803
AMAG_15917
PH domain-containing protein.
    
 0.803
AMAG_18146
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial.
  
 
  0.772
AMAG_13550
Ribosomal protein L1.
     
 0.751
AMAG_13803
Ribosomal protein L1.
     
 0.751
AMAG_07826
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.745
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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