STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_11079Zpr1 domain-containing protein. (284 aa)    
Predicted Functional Partners:
AMAG_02240
Translation elongation factor EF-1, subunit alpha.
    
 
 0.898
AMAG_11300
Translation elongation factor Tu.
    
 
 0.898
AMAG_04606
Uncharacterized protein.
   
    0.715
AMAG_03315
Uncharacterized protein.
   
    0.715
AMAG_01187
GTP_EFTU_D3 domain-containing protein.
    
 
 0.696
AMAG_05371
Uncharacterized protein.
    
 
 0.696
AMAG_02646
WD_REPEATS_REGION domain-containing protein.
   
    0.690
AMAG_06385
WD_REPEATS_REGION domain-containing protein.
   
    0.690
AMAG_17724
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.681
AMAG_00891
RPOLA_N domain-containing protein.
   
    0.681
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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