STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_10412Uncharacterized protein. (687 aa)    
Predicted Functional Partners:
AMAG_18912
RanBP2-type domain-containing protein.
    
 0.765
AMAG_05663
Uncharacterized protein.
    
  0.696
AMAG_12376
Uncharacterized protein.
    
  0.696
AMAG_04839
Uncharacterized protein.
    
 0.690
AMAG_03520
Uncharacterized protein.
    
 0.690
AMAG_12601
Uncharacterized protein.
   
 0.679
AMAG_01809
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.654
AMAG_04311
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.654
AMAG_08777
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.634
AMAG_08855
ULK/ULK protein kinase.
    
 0.634
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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