STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_19327Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
AMAG_09325
Uncharacterized protein.
    
 0.969
AMAG_06810
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.880
AMAG_15985
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.880
AMAG_13523
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.858
AMAG_13775
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.858
AMAG_05219
Uncharacterized protein.
    
 0.851
AMAG_16112
Uncharacterized protein.
    
 0.851
AMAG_00238
Uncharacterized protein.
   
 0.828
AMAG_10797
Uncharacterized protein.
   
 0.828
AMAG_00938
Uncharacterized protein.
   
 0.811
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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