STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_11847Uncharacterized protein. (373 aa)    
Predicted Functional Partners:
AMAG_11008
tRNA modification GTPase TrmE; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
 0.935
AMAG_11618
Small GTP-binding protein domain.
  
 0.935
AMAG_00147
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
 0.766
AMAG_10697
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
  
 0.766
AMAG_13963
DAO domain-containing protein.
   
 
 0.567
AMAG_17242
DAO domain-containing protein.
   
 
 0.567
AMAG_07670
DAO domain-containing protein.
     
 0.564
AMAG_09832
DAO domain-containing protein.
     
 0.564
AMAG_00325
Uncharacterized protein.
  
   0.532
AMAG_01894
Uncharacterized protein.
  
   0.529
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.