STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_11886Uncharacterized protein. (512 aa)    
Predicted Functional Partners:
AMAG_06873
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
   
 0.996
AMAG_02968
Uncharacterized protein.
   
 0.989
AMAG_08570
Uncharacterized protein.
    
 0.970
AMAG_09993
Uncharacterized protein.
    
 0.970
AMAG_10250
Uncharacterized protein.
   
 0.970
AMAG_19565
Uncharacterized protein.
    
 0.967
AMAG_13937
Uncharacterized protein.
    
 0.967
AMAG_02745
t-SNARE coiled-coil homology domain-containing protein.
    
 0.818
AMAG_06279
t-SNARE coiled-coil homology domain-containing protein.
    
 0.818
AMAG_13408
Uncharacterized protein.
    
 0.766
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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