STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_13390Uncharacterized protein; Belongs to the NDK family. (747 aa)    
Predicted Functional Partners:
AMAG_12401
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 
 0.978
AMAG_01274
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.976
AMAG_04685
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.976
AMAG_00551
30S ribosomal protein S12.
  
 0.975
AMAG_02062
30S ribosomal protein S12.
  
 0.975
AMAG_01578
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.973
AMAG_04075
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.973
AMAG_18199
Uncharacterized protein.
  
 0.971
AMAG_06962
Uncharacterized protein.
  
 0.971
AMAG_12555
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
 0.971
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.