AMAG_13911 protein (Allomyces macrogynus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMAG_13911

Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (412 aa)

Predicted Functional Partners:

AMAG_01067

0.663

AMAG_05249

0.663

AMAG_03118

0.630

AMAG_10389

0.630

AMAG_01259

0.608

AMAG_05450

0.608

AMAG_06001

0.607

AMAG_18571

0.607

AMAG_09379

0.607

AMAG_11633

0.607

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_01067	AMAG_03118	A0A0L0RXS9	A0A0L0S4F8	Uncharacterized protein.	Small GTP-binding protein domain.	0.449
AMAG_01067	AMAG_10389	A0A0L0RXS9	A0A0L0SUX8	Uncharacterized protein.	Uncharacterized protein.	0.449
AMAG_01067	AMAG_13911	A0A0L0RXS9	A0A0L0T2S8	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.663
AMAG_01259	AMAG_13911	A0A0L0RZ68	A0A0L0T2S8	Ornithine aminotransferase.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.608
AMAG_03118	AMAG_01067	A0A0L0S4F8	A0A0L0RXS9	Small GTP-binding protein domain.	Uncharacterized protein.	0.449
AMAG_03118	AMAG_05249	A0A0L0S4F8	A0A0L0SB43	Small GTP-binding protein domain.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.449
AMAG_03118	AMAG_13911	A0A0L0S4F8	A0A0L0T2S8	Small GTP-binding protein domain.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.630
AMAG_05249	AMAG_03118	A0A0L0SB43	A0A0L0S4F8	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Small GTP-binding protein domain.	0.449
AMAG_05249	AMAG_10389	A0A0L0SB43	A0A0L0SUX8	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Uncharacterized protein.	0.449
AMAG_05249	AMAG_13911	A0A0L0SB43	A0A0L0T2S8	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.663
AMAG_05450	AMAG_13911	A0A0L0SC07	A0A0L0T2S8	Ornithine aminotransferase.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.608
AMAG_06001	AMAG_13911	A0A0L0SDW9	A0A0L0T2S8	Methyltransf_33 domain-containing protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.607
AMAG_09379	AMAG_13911	A0A0L0SPC2	A0A0L0T2S8	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.607
AMAG_10389	AMAG_01067	A0A0L0SUX8	A0A0L0RXS9	Uncharacterized protein.	Uncharacterized protein.	0.449
AMAG_10389	AMAG_05249	A0A0L0SUX8	A0A0L0SB43	Uncharacterized protein.	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.	0.449
AMAG_10389	AMAG_13911	A0A0L0SUX8	A0A0L0T2S8	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.630
AMAG_11633	AMAG_13911	A0A0L0SVZ6	A0A0L0T2S8	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	0.607
AMAG_13911	AMAG_01067	A0A0L0T2S8	A0A0L0RXS9	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Uncharacterized protein.	0.663
AMAG_13911	AMAG_01259	A0A0L0T2S8	A0A0L0RZ68	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Ornithine aminotransferase.	0.608
AMAG_13911	AMAG_03118	A0A0L0T2S8	A0A0L0S4F8	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.	Small GTP-binding protein domain.	0.630