AMAG_13868 protein (Allomyces macrogynus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMAG_13868

AGC protein kinase. (1595 aa)

Predicted Functional Partners:

AMAG_07017

0.948

AMAG_05928

0.648

AMAG_04260

0.638

AMAG_01765

0.637

AMAG_13003

0.633

AMAG_14111

0.633

AMAG_00674

0.595

AMAG_04984

0.595

AMAG_03663

0.595

AMAG_08627

0.595

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_00674	AMAG_01765	A0A0L0RX51	A0A0L0RZQ5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CAMK/RAD53 protein kinase.	0.612
AMAG_00674	AMAG_04260	A0A0L0RX51	A0A0L0S7X9	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CAMK/RAD53 protein kinase.	0.612
AMAG_00674	AMAG_05928	A0A0L0RX51	A0A0L0SDP6	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	CMGC/CDK/CDK5 protein kinase.	0.893
AMAG_00674	AMAG_13003	A0A0L0RX51	A0A0L0T110	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.426
AMAG_00674	AMAG_13868	A0A0L0RX51	A0A0L0T2X5	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	AGC protein kinase.	0.595
AMAG_00674	AMAG_14111	A0A0L0RX51	A0A0L0T4U4	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	Uncharacterized protein.	0.426
AMAG_01765	AMAG_00674	A0A0L0RZQ5	A0A0L0RX51	CAMK/RAD53 protein kinase.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.612
AMAG_01765	AMAG_03663	A0A0L0RZQ5	A0A0L0SAA7	CAMK/RAD53 protein kinase.	Uncharacterized protein; Belongs to the cyclin family.	0.612
AMAG_01765	AMAG_04984	A0A0L0RZQ5	A0A0L0S702	CAMK/RAD53 protein kinase.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.612
AMAG_01765	AMAG_05928	A0A0L0RZQ5	A0A0L0SDP6	CAMK/RAD53 protein kinase.	CMGC/CDK/CDK5 protein kinase.	0.611
AMAG_01765	AMAG_08627	A0A0L0RZQ5	A0A0L0SMB2	CAMK/RAD53 protein kinase.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.612
AMAG_01765	AMAG_13868	A0A0L0RZQ5	A0A0L0T2X5	CAMK/RAD53 protein kinase.	AGC protein kinase.	0.637
AMAG_03663	AMAG_01765	A0A0L0SAA7	A0A0L0RZQ5	Uncharacterized protein; Belongs to the cyclin family.	CAMK/RAD53 protein kinase.	0.612
AMAG_03663	AMAG_04260	A0A0L0SAA7	A0A0L0S7X9	Uncharacterized protein; Belongs to the cyclin family.	CAMK/RAD53 protein kinase.	0.612
AMAG_03663	AMAG_05928	A0A0L0SAA7	A0A0L0SDP6	Uncharacterized protein; Belongs to the cyclin family.	CMGC/CDK/CDK5 protein kinase.	0.893
AMAG_03663	AMAG_13003	A0A0L0SAA7	A0A0L0T110	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.426
AMAG_03663	AMAG_13868	A0A0L0SAA7	A0A0L0T2X5	Uncharacterized protein; Belongs to the cyclin family.	AGC protein kinase.	0.595
AMAG_03663	AMAG_14111	A0A0L0SAA7	A0A0L0T4U4	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein.	0.426
AMAG_04260	AMAG_00674	A0A0L0S7X9	A0A0L0RX51	CAMK/RAD53 protein kinase.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.612
AMAG_04260	AMAG_03663	A0A0L0S7X9	A0A0L0SAA7	CAMK/RAD53 protein kinase.	Uncharacterized protein; Belongs to the cyclin family.	0.612