STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_14100Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures. (124 aa)    
Predicted Functional Partners:
AMAG_00509
Dynein light chain roadblock.
   
 0.979
AMAG_04540
Uncharacterized protein.
   
 0.977
AMAG_08659
WD_REPEATS_REGION domain-containing protein.
    
 0.886
AMAG_10088
WD_REPEATS_REGION domain-containing protein.
    
 0.886
AMAG_13390
Uncharacterized protein; Belongs to the NDK family.
    
   0.876
AMAG_13644
Uncharacterized protein; Belongs to the NDK family.
    
   0.876
AMAG_08744
Uncharacterized protein.
   
 0.864
AMAG_10168
Uncharacterized protein.
   
 0.864
AMAG_03830
WD_REPEATS_REGION domain-containing protein.
    
 0.820
AMAG_06997
WD_REPEATS_REGION domain-containing protein.
    
 0.820
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.