STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_14255U3 small nucleolar RNA-associated protein 22. (1095 aa)    
Predicted Functional Partners:
AMAG_00911
WD_REPEATS_REGION domain-containing protein.
   
 0.998
AMAG_02419
WD_REPEATS_REGION domain-containing protein.
   
 0.998
AMAG_00958
rRNA 2'-O-methyltransferase fibrillarin.
   
 0.998
AMAG_18180
BP28CT domain-containing protein.
   
 0.998
AMAG_06872
BP28CT domain-containing protein.
   
 0.998
AMAG_13142
WD_REPEATS_REGION domain-containing protein.
   
 0.998
AMAG_19806
Uncharacterized protein.
   
 0.998
AMAG_17328
WD_REPEATS_REGION domain-containing protein.
   
 0.998
AMAG_17183
Uncharacterized protein.
   
 0.998
AMAG_00071
Uncharacterized protein.
   
 0.997
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.