STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_20079Small GTP-binding protein domain. (214 aa)    
Predicted Functional Partners:
AMAG_05843
GTP-binding protein ypt1.
  
0.976
AMAG_03075
Sec2p domain-containing protein.
    
 0.891
AMAG_19336
Sec2p domain-containing protein.
    
 0.891
AMAG_02819
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.879
AMAG_14928
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.879
AMAG_00933
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.874
AMAG_01695
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.874
AMAG_01696
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.874
AMAG_02428
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.874
AMAG_18281
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.874
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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