AMAG_15370 protein (Allomyces macrogynus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AMAG_15370

Uncharacterized protein. (188 aa)

Predicted Functional Partners:

AMAG_05135

0.997

AMAG_05852

0.997

AMAG_12177

0.997

AMAG_14767

0.997

AMAG_20265

0.997

AMAG_16028

0.997

AMAG_16713

0.997

AMAG_06600

0.995

AMAG_12754

0.995

AMAG_04851

0.981

Your Current Organism:

Allomyces macrogynus

NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMAG_04851	AMAG_05135	A0A0L0S6H1	A0A0L0SAZ1	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.966
AMAG_04851	AMAG_05852	A0A0L0S6H1	A0A0L0SDC8	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.961
AMAG_04851	AMAG_06600	A0A0L0S6H1	A0A0L0SEH9	CAP-Gly domain-containing protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.938
AMAG_04851	AMAG_12177	A0A0L0S6H1	A0A0L0SXI1	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.961
AMAG_04851	AMAG_12754	A0A0L0S6H1	A0A0L0T1F6	CAP-Gly domain-containing protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.938
AMAG_04851	AMAG_14767	A0A0L0S6H1	A0A0L0T5S6	CAP-Gly domain-containing protein.	Uncharacterized protein; Belongs to the actin family.	0.968
AMAG_04851	AMAG_15370	A0A0L0S6H1	A0A0L0T7A7	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.981
AMAG_04851	AMAG_16028	A0A0L0S6H1	A0A0L0TAH7	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.966
AMAG_04851	AMAG_16713	A0A0L0S6H1	A0A0L0TC04	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.996
AMAG_04851	AMAG_20265	A0A0L0S6H1	A0A0L0T8W6	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.968
AMAG_05135	AMAG_04851	A0A0L0SAZ1	A0A0L0S6H1	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.966
AMAG_05135	AMAG_05852	A0A0L0SAZ1	A0A0L0SDC8	Uncharacterized protein.	Uncharacterized protein.	0.996
AMAG_05135	AMAG_06600	A0A0L0SAZ1	A0A0L0SEH9	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.973
AMAG_05135	AMAG_12177	A0A0L0SAZ1	A0A0L0SXI1	Uncharacterized protein.	Uncharacterized protein.	0.996
AMAG_05135	AMAG_12754	A0A0L0SAZ1	A0A0L0T1F6	Uncharacterized protein.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.973
AMAG_05135	AMAG_14767	A0A0L0SAZ1	A0A0L0T5S6	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.993
AMAG_05135	AMAG_15370	A0A0L0SAZ1	A0A0L0T7A7	Uncharacterized protein.	Uncharacterized protein.	0.997
AMAG_05135	AMAG_16713	A0A0L0SAZ1	A0A0L0TC04	Uncharacterized protein.	Uncharacterized protein.	0.998
AMAG_05135	AMAG_20265	A0A0L0SAZ1	A0A0L0T8W6	Uncharacterized protein.	Uncharacterized protein.	0.993
AMAG_05852	AMAG_04851	A0A0L0SDC8	A0A0L0S6H1	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.961