STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_16594Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (575 aa)    
Predicted Functional Partners:
AMAG_01733
FYVE-type domain-containing protein.
    
 0.993
AMAG_04224
FYVE-type domain-containing protein.
    
 0.993
AMAG_06873
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.943
AMAG_05211
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.938
AMAG_16101
t-SNARE coiled-coil homology domain-containing protein.
   
 
 0.938
AMAG_11480
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.929
AMAG_19952
t-SNARE coiled-coil homology domain-containing protein.
    
 
 0.929
AMAG_01663
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.917
AMAG_02575
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.917
AMAG_04158
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.917
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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