STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_20427NFACT-R_1 domain-containing protein. (801 aa)    
Predicted Functional Partners:
AMAG_02806
RING-type domain-containing protein.
    
 
 0.947
AMAG_14909
RING-type domain-containing protein.
    
 
 0.947
AMAG_01274
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.891
AMAG_04685
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.889
AMAG_04955
Ribosomal_L18_c domain-containing protein.
    
   0.887
AMAG_03634
Ribosomal_L18_c domain-containing protein.
    
   0.887
AMAG_12862
Archaeal ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
    
   0.884
AMAG_14239
Archaeal ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
    
   0.884
AMAG_14014
Ribosomal protein L19.
    
   0.882
AMAG_01686
Ribosomal protein L29.
    
   0.877
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.