STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_16788BZIP domain-containing protein. (455 aa)    
Predicted Functional Partners:
AMAG_17694
TPR_REGION domain-containing protein.
    
 0.851
AMAG_03152
Uncharacterized protein.
    
 0.851
AMAG_03162
Uncharacterized protein.
    
 0.851
AMAG_18775
Uncharacterized protein.
    
 0.851
AMAG_01452
Uncharacterized protein.
    
 0.800
AMAG_10598
Lysophospholipase.
    
 0.790
AMAG_00989
DNA ligase.
    
 0.750
AMAG_02500
DNA ligase.
    
 0.750
AMAG_07821
Guanylate kinase-like domain-containing protein.
    
 0.699
AMAG_09605
Cytochrome b5 heme-binding domain-containing protein.
    
 0.699
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.