STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_16721GYF domain-containing protein. (432 aa)    
Predicted Functional Partners:
AMAG_04620
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.985
AMAG_03184
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.925
AMAG_10461
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.925
AMAG_07771
Pre-mRNA-processing-splicing factor 8.
    
 
 0.920
AMAG_09728
Pre-mRNA-processing-splicing factor 8.
    
 
 0.920
AMAG_03217
Uncharacterized protein.
   
 
 0.918
AMAG_10486
Uncharacterized protein.
   
 
 0.918
AMAG_20348
Sm domain-containing protein.
    
 
 0.915
AMAG_16673
Sm domain-containing protein.
    
 
 0.915
AMAG_02913
Uncharacterized protein.
   
 
 0.908
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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