STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_17132Uncharacterized protein; Belongs to the peptidase M18 family. (479 aa)    
Predicted Functional Partners:
AMAG_14853
Autophagy-related protein.
   
 
 0.703
AMAG_15321
Autophagy-related protein.
   
 
 0.703
AMAG_17110
Uncharacterized protein.
    
 
 0.637
AMAG_01067
Uncharacterized protein.
    
 
 0.607
AMAG_05249
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
    
 
 0.607
AMAG_01676
Uncharacterized protein; Belongs to the peptidase M24B family.
   
 
 0.565
AMAG_04170
Uncharacterized protein; Belongs to the peptidase M24B family.
   
 
 0.565
AMAG_11403
AMP_N domain-containing protein.
   
 
 0.532
AMAG_12978
Alpha-mann_mid domain-containing protein.
   
 
 0.532
AMAG_14131
Alpha-mann_mid domain-containing protein.
   
 
 0.532
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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