STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMAG_17457Developmentally-regulated GTP-binding protein 1. (368 aa)    
Predicted Functional Partners:
AMAG_12737
Uncharacterized protein.
   
 
 0.984
AMAG_14706
C3H1-type domain-containing protein.
   
 
 0.984
AMAG_03300
RWD domain-containing protein.
   
 
 0.937
AMAG_10560
RWD domain-containing protein.
   
 
 0.937
AMAG_05979
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
   0.905
AMAG_05079
Uncharacterized protein.
    
   0.887
AMAG_09120
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.885
AMAG_12862
Archaeal ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
   
   0.883
AMAG_14239
Archaeal ribosomal protein L23; Belongs to the universal ribosomal protein uL23 family.
   
   0.883
AMAG_00899
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.825
Your Current Organism:
Allomyces macrogynus
NCBI taxonomy Id: 578462
Other names: A. macrogynus ATCC 38327, Allomyces macrogynus ATCC 38327
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