STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F0ZW68_DICPURibosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (398 aa)    
Predicted Functional Partners:
F0ZDF1_DICPU
Uncharacterized protein.
   
 
 0.996
F0ZY00_DICPU
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.996
F0ZZR1_DICPU
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.995
F0ZEI9_DICPU
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.992
F0ZGY9_DICPU
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
   0.989
F0Z7B6_DICPU
60S ribosomal protein L5.
   
 
 0.987
F0Z9L2_DICPU
Peptidase_M24 domain-containing protein.
   
 
 0.987
F0ZVA4_DICPU
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.983
F0ZTN9_DICPU
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.982
F1A4H1_DICPU
RRM domain-containing protein.
   
 
 0.981
Your Current Organism:
Dictyostelium purpureum
NCBI taxonomy Id: 5786
Other names: D. purpureum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.