STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN02664.1Methyltransferase domain-containing protein. (334 aa)    
Predicted Functional Partners:
SFN02655.1
Fe-S-cluster-containing dehydrogenase component.
    
  0.782
SFN02644.1
DMSO reductase anchor subunit.
    
  0.776
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
 0.627
cysC-2
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
 0.627
SFN41796.1
Thioredoxin reductase (NADPH).
   
 
 0.622
SFN02693.1
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.549
SFN02679.1
Di-and tricarboxylate transporter.
       0.526
SFN30485.1
Transcriptional regulator, ArsR family.
    
 0.523
SFN02628.1
Putative salt-induced outer membrane protein.
       0.477
SFM99915.1
Amino acid adenylation domain-containing protein.
   
 
 0.440
Your Current Organism:
Dokdonella immobilis
NCBI taxonomy Id: 578942
Other names: CGMCC 1.7659, D. immobilis, Dokdonella immobilis Liu et al. 2013, Dokdonella sp. LM2-5, JCM 15763, strain LM2-5
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