STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN10116.1Tryptophan halogenase. (501 aa)    
Predicted Functional Partners:
SFN09823.1
Iron complex outermembrane recepter protein.
 
     0.786
SFN10107.1
Alpha-glucosidase.
 
     0.766
SFN10238.1
Transcriptional regulator, LacI family.
  
     0.688
SFN10135.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
       0.682
SFN10146.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.682
SFN10274.1
Maltose/moltooligosaccharide transporter.
 
     0.669
SFN52653.1
Tryptophan halogenase.
 
  
 
0.647
SFN04596.1
Predicted methyltransferase.
  
  
  0.626
SFN29610.1
Predicted methyltransferase.
  
  
  0.603
SFN09864.1
Hypothetical protein.
  
 
  0.597
Your Current Organism:
Dokdonella immobilis
NCBI taxonomy Id: 578942
Other names: CGMCC 1.7659, D. immobilis, Dokdonella immobilis Liu et al. 2013, Dokdonella sp. LM2-5, JCM 15763, strain LM2-5
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