STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN35720.1Hypothetical protein. (236 aa)    
Predicted Functional Partners:
SFN35733.1
Predicted alpha/beta hydrolase.
       0.773
SFN35706.1
RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain).
       0.661
SFN35746.1
2,4-dienoyl-CoA reductase.
       0.623
SFN35757.1
Hypothetical protein; Belongs to the pirin family.
       0.487
SFN35694.1
Cold-shock DNA-binding protein family.
       0.445
Your Current Organism:
Dokdonella immobilis
NCBI taxonomy Id: 578942
Other names: CGMCC 1.7659, D. immobilis, Dokdonella immobilis Liu et al. 2013, Dokdonella sp. LM2-5, JCM 15763, strain LM2-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.