STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN40354.1RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (408 aa)    
Predicted Functional Partners:
SFN40342.1
Putative ABC transport system ATP-binding protein.
 
   0.918
SFN40328.1
Putative ABC transport system permease protein.
 
     0.911
SFN40317.1
Putative ABC transport system permease protein.
 
     0.910
SFN43246.1
Putative ABC transport system permease protein.
  
    0.712
SFN43215.1
Putative ABC transport system permease protein.
  
    0.677
SFN43230.1
Putative ABC transport system permease protein.
  
    0.649
SFN47326.1
Putative ABC transport system permease protein.
 
    0.647
SFN43281.1
HlyD family secretion protein.
  
     0.639
SFN51809.1
Putative ABC transport system permease protein.
 
    0.569
SFN29504.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.566
Your Current Organism:
Dokdonella immobilis
NCBI taxonomy Id: 578942
Other names: CGMCC 1.7659, D. immobilis, Dokdonella immobilis Liu et al. 2013, Dokdonella sp. LM2-5, JCM 15763, strain LM2-5
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.