STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN57722.1Isoquinoline 1-oxidoreductase, alpha subunit. (157 aa)    
Predicted Functional Partners:
SFN57710.1
CO or xanthine dehydrogenase, Mo-binding subunit.
  0.979
SFN63191.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
  0.960
SFN19760.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
  0.935
SFN27288.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
  0.925
SFN20224.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
  0.922
SFN63205.1
Xanthine dehydrogenase accessory factor.
  
 
  0.802
SFN29022.1
Molybdenum cofactor cytidylyltransferase.
 
 
 0.787
SFN29037.1
Xanthine dehydrogenase accessory factor.
  
 
  0.777
SFM96833.1
Xanthine dehydrogenase accessory factor.
  
 
  0.721
SFN57734.1
Cytochrome c, mono-and diheme variants.
  
 
 0.720
Your Current Organism:
Dokdonella immobilis
NCBI taxonomy Id: 578942
Other names: CGMCC 1.7659, D. immobilis, Dokdonella immobilis Liu et al. 2013, Dokdonella sp. LM2-5, JCM 15763, strain LM2-5
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